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Fig. 3 | Source Code for Biology and Medicine

Fig. 3

From: TRX-LOGOS - a graphical tool to demonstrate DNA information content dependent upon backbone dynamics in addition to base sequence

Fig. 3

TRX-logos plots comparing Forkhead box binding site evolution to the human FOX protein evolution gene tree. The gene tree was produced using mRNA Clustal alignments downloaded from NCBI and the neighbor-joining algorithm in MEGA 6.0 (Tamura et al. [38]). NCBI identifiers were used to label the tree. TRX-logos plots are color framed to match the branches on the tree. 7 bp flanking regions were included

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Source Code for Biology and Medicine

ISSN: 1751-0473