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Figure 1 | Source Code for Biology and Medicine

Figure 1

From: Annokey: an annotation tool based on key term search of the NCBI Entrez Gene database

Figure 1

Screen-shot of an example detailed search report, showing matches for two genes RPA1 and BRCA1 against the search terms “[Bb]reast [Cc]ancer” and “DNA [Rr]epair”. The top part of the report shows meta information about the search. This is followed by an entry for each of the genes. Each gene entry contains hyperlinks back to the online Entrez Gene database entry for the gene, its list of GeneRIFs and PubMed references. The green coloured table summarises the matches for each search term, including the rank of the term and the fields where matches were found and their frequency. Following the table is a list of each search term showing all the contexts where the term was matched. This section can be quite long, so it is hidden by default, and can be expanded by clicking on the “hide/show details” button. In the picture above, the details are shown for RPA1 but hidden for BRCA1.

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