MmPalateMiRNA, an R package compendium illustrating analysis of miRNA microarray data

Table 2 Significantly differentially expressed miRNAs for GD 13 versus 12

miRNA Name	Organism	Fold Change	T-stat	Adj p-value
LET-7B	MMU miRNAs	1.78	7.72	¡ 0.001
MIR-193A-3P	MMU miRNAs	2.94	6.85	¡ 0.001
LET-7C	MMU miRNAs	1.50	5.74	0.001
MIR-140-5P	MMU miRNAs	1.46	5.31	0.001
MIR-342	Other miRNAs	0.56	-5.18	0.001
MIR-31	MMU miRNAs	1.56	4.98	0.002
MIR-193B	MMU miRNAs	1.66	4.86	0.002
MIR-301	Other miRNAs	0.78	-4.44	0.005
MIR-20B	Other miRNAs	0.75	-4.37	0.006
MIR-543-3P	MMU miRNAs	0.69	-3.91	0.015
MIR-301B	Other miRNAs	0.71	-3.83	0.015
MIR-342-3P	MMU miRNAs	0.58	-3.83	0.015
MIR-22	MMU miRNAs	1.34	3.78	0.015
LET-7I	MMU miRNAs	1.35	3.75	0.015
MIR-152	MMU miRNAs	1.25	3.75	0.015
MIR-298	MMU miRNAs	0.77	-3.45	0.030
MIR-148A	MMU miRNAs	1.34	3.41	0.030
MIR-210	MMU miRNAs	1.33	3.40	0.030
MIR-422A	Other miRNAs	1.67	3.34	0.033
MIR-23A	MMU miRNAs	1.29	3.32	0.033
MIR-20A	MMU miRNAs	0.79	-3.30	0.033
MIR-347	Other miRNAs	1.19	3.18	0.042

Table 2: miRNA name, organism, fold change, moderated t-statistic, and adjusted p-values for comparisons in miRNA expression between gestational days 13 and 12. miRNAs which are up-regulated on GD 13 are indicated by fold-changes above one. P-values are adjusted by the method of Benjamini & Hochberg [65], which controls the expected false discovery rate.

ISSN: 1751-0473