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Table 3 Performance of software for de-multiplexing a single FASTQ file

From: TagDigger: user-friendly extraction of read counts from GBS and RAD-seq data

Software Time (min) in TagDigger 169
Stacks 1.4 156
pyRAD 3.0 358
  1. The FASTQ file analyzed is the same as that used to produce TablesĀ 1 and 2