Table 2 Features of Wormpath compared to other softwares
From: Wormpath: searching for molecular interaction networks in Caenorhabditis elegans
Wormpath | Cytoscape | Pathway projector | Ingenuity pathway analysis | |
|---|---|---|---|---|
Species | C. elegans | Generic | Multiple | Human/Mouse/Rat |
Implementation | Web application/Perl, CGI | Desktop application/Java | Web application/Google Maps API | Web application/Java |
Database | Wormbase | Generic | KEGG | Undisclosed |
Scope of analyses | Networks/Functional annotation | Networks/Multiple add-ons | Search details on pathways/Map experimental data | Networks/Functional annotation |
Target audience | Bench scientists | Computational biologists | Bench scientists | Bench scientists |
Statistics | Scores, significance tests | Add-ons required | None | Scores, significance tests |
License | GPL | LGPL | KEGG license required | Commercial |