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Table 2 Representation of amino acid metabolism by P. carinii enzymes in comparison to free living fungi

From: EC2KEGG: a command line tool for comparison of metabolic pathways

Pathway ID

Pathway

Pc

Spo

Pc

Pc

Sce

Pc

Pc

Afm

Pc

Pc

    

Spo

Spo

 

Sce

Sce

 

Afm

Afm

00250

Alanine, aspartate and glutamate metabolism

11

21

10

1

23

10

1

24

10

1

00260

Glycine, serine and threonine metabolism

10

24

7

3

27

9

1

34

9

1

00270

Cysteine and methionine metabolism

10

26

7

3

30

8

2

31

10

0

00280

Valine, leucine and isoleucine degradation

5

7

4

1

8

4

1

19

4

1

00290

Valine, leucine and isoleucine biosynthesis

0

7

0

0

8

0

0

8

0

0

00300

Lysine biosynthesis

1

10

0

1

10

0

1

11

0

1

00310

Lysine degradation

4

9

4

0

9

4

0

11

4

0

00330

Arginine and proline metabolism

8

28

4

4

28

5

3

35

5

3

00340

Histidine metabolism

1

9

0

1

10

0

1

12

0

1

00350

Tyrosine metabolism

1

9

1

0

8

1

0

18

1

0

00360

Phenylalanine metabolism

2

7

2

0

7

2

0

14

2

0

00380

Tryptophan metabolism

8

7

3

5

13

8

0

19

7

1

00400

Phenylalanine, tyrosine and tryptophan biosynthesis

10

19

10

0

20

10

0

20

10

0

  1. Reference fungi include S. pombe (Spo), S. cerevisiae (Sce), and A. fumigatus (Afm).