Figure 1

Software design of CELLSEGM . The solid box surrounds the processing steps occuring in CELLSEGM, from image conversion until the post-analysis of the segmentation data. The batch processing cellsegmentation is the tool for cell segmentation of high-throughput data. The quality of the resulting segmentation can be assessed in v iewsegm, and the processing chain can be restarted on demand (dashed line) with other parameter settings. The separate functions (m-files) can also be executed independently.