Skip to main content


Springer Nature is making SARS-CoV-2 and COVID-19 research free. View research | View latest news | Sign up for updates

Figure 2 | Source Code for Biology and Medicine

Figure 2

From: MALINA: a web service for visual analytics of human gut microbiota whole-genome metagenomic reads

Figure 2

Examples of visualizations by MALINA. Metagenomic samples are denoted by text tags. (A) BCA plot of phylogenetic abundance, with the clusters visualized as ellipses and the samples connected with the centers of their respective clusters by lines. (B) PCA of COGs associated with vitamin metabolism, with drivers shown by red arrows. (C) Dendrogram heatmap of phylogenetic abundance based on hierarchical clustering algorithm (with samples as columns and genera as rows).

Back to article page