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Table 2 Elapsed times and speedups obtained with ParaHaplo on the HapMap 3 JPT data and CHB of chromosome 22

From: ParaHaplo: A program package for haplotype-based whole-genome association study using parallel computing

Number of Processing Units

Calculation Time

Speed Ratio a

1

1 h

19 m

58 s

1

64

 

3 m

41 s

22

128

 

2 m

1 s

40

256

 

1 m

25 s

56

512

  

53 s

91

768

  

47 s

101

1536

  

41 s

116

  1. aRatio of Computational Time of Single Processor to Computational Time of Multiple Processors
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