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Table 1 Pairwise taxon by putative ortholog matrix among 14 species and 20658 RefSeq mRNA Gene IDs

From: OCPAT: an online codon-preserved alignment tool for evolutionary genomic analysis of protein coding sequences

 

Human

Chimp

Macaque

Mouse

Rat

Rabbit

Dog

Cow

Armadillo

Elephant

Tenrec

Opossum

Chicken

Frog

Human

-

19798

20078

18009

17732

10942

18964

18437

8924

9987

10509

13250

9126

4931

Chimp

860

-

19574

17561

17336

11390

18550

18093

9536

10551

10999

13314

9540

5617

Macaque

580

1084

-

17825

17588

11254

18740

18299

9322

10323

10811

13396

9444

5421

Mouse

2649

3097

2833

-

19779

12243

18385

18222

10429

11350

12464

15479

11651

7552

Rat

2926

3322

3070

879

-

12294

18226

18093

10540

11481

12579

15554

11812

7811

Rabbit

9716

9268

9404

8415

8364

-

11844

12159

13196

13153

13417

12582

11936

11405

Dog

1694

2108

1918

2273

2432

8814

-

18703

10030

11047

11729

14430

10564

6549

Cow

2221

2565

2359

2436

2565

8499

1955

-

10411

11380

12022

14353

10639

6906

Armadillo

11734

11122

11336

10229

10118

7462

10628

10247

-

7329

13281

11718

12034

12437

Elephant

10671

10107

10335

9308

9177

7505

9611

9278

7329

-

13334

11965

11811

11838

Tenrec

10149

9659

9847

8194

8079

7241

8929

8636

7377

7324

-

13265

12741

12022

Opossum

7408

7344

7262

5179

5104

8076

6228

6305

8940

8693

7393

-

15290

11921

Chicken

11532

11118

11214

9007

8846

8722

10094

10019

8624

8847

7917

5368

-

15769

Frog

15727

15041

15237

13106

12847

9253

14109

13752

8221

8820

8636

8737

4889

-

  1. above diagonal = shared RefSeqs
  2. below diagonal = not shared RefSeqs